Repositories list

• BOEM

  Public
  Bureau of Ocean Energy Management collaboration with the University of Florida

  Python

  •

  MIT License

  •3•1•6•2•Updated Dec 8, 2025Dec 8, 2025

• DeepForest

  Public
  Python Package for Airborne RGB machine learning

  Python

  •

  MIT License

  •224•677•83•22•Updated Dec 8, 2025Dec 8, 2025

• MillionTrees

  Public
  The MillionTreesBenchmark

  Python

  •

  GNU General Public License v3.0

  •6•23•9•0•Updated Dec 8, 2025Dec 8, 2025

• everwatch-predictions

  Public
  Data on Everglades wading bird colony abundances from the EverWatch computer vision workflow

  Creative Commons Zero v1.0 Universal

  •1•1•0•0•Updated Dec 4, 2025Dec 4, 2025

• wiki

  Public
  Weecology's Wiki - how to navigate life in the lab from choosing and pursuing a career path to using the printer

  HTML

  •

  Other

  •7•1•8•4•Updated Dec 4, 2025Dec 4, 2025

• everwatch-workflow

  Public
  Workflow for processing UAS imagery into data on bird location and species for near real-time monitoring in the Everglades

  Python

  •

  MIT License

  •2•1•0•3•Updated Dec 4, 2025Dec 4, 2025

• ogrants

  Public
  Open grants list

  jekyllyamlfunding+ 4researchhacktoberfestgrantshacktoberfest2021

  R

  •

  Other

  •48•143•16•0•Updated Dec 4, 2025Dec 4, 2025

• portal-forecasts

  Public
  Jupyter Notebook

  •

  MIT License

  •2•0•0•0•Updated Dec 4, 2025Dec 4, 2025

• PortalData

  Public
  Official Repo of the Portal Project Data

  R

  •

  Other

  •30•51•5•1•Updated Dec 4, 2025Dec 4, 2025

• BOEM-webapp

  Public

  weecology/BOEM-webapp’s past year of commit activity
  JavaScript

  •

  MIT License

  •1•1•1•1•Updated Dec 3, 2025Dec 3, 2025

• EvergladesWadingBird

  Public
  Data from the Everglades breeding bird monitoring project

  R

  •

  Creative Commons Zero v1.0 Universal

  •6•5•20•2•Updated Dec 2, 2025Dec 2, 2025

• everglades-forecasting

  Public
  R

  •0•1•0•0•Updated Dec 1, 2025Dec 1, 2025

• mvgamportal

  Public
  R

  •1•3•9•1•Updated Nov 19, 2025Nov 19, 2025

• wader

  Public
  A collection of functions to retrieve and summarize the EvergladesWadingBird Data

  R

  •

  MIT License

  •1•2•4•0•Updated Nov 19, 2025Nov 19, 2025

• deepforest-pretrain

  Public
  Tools for generating LIDAR-derived pretraining datasets for tree prediction models.

  Python

  •0•0•0•0•Updated Nov 5, 2025Nov 5, 2025

• edenR

  Public
  R

  •

  Other

  •1•0•2•2•Updated Oct 27, 2025Oct 27, 2025

• forecasting-course

  Public
  Morgan Ernest & Ethan White's Ecological Forecasting & Dynamics Course

  hugo-themeforecastingecology+ 1open-educational-resources

  HTML

  •

  Other

  •11•24•20•0•Updated Oct 23, 2025Oct 23, 2025

• portalcasting

  Public
  Model development, deployment, and evaluation for forecasting Portal ecosystem dynamics

  workflowrshiny+ 6reproducible-researchportalforecastingr-packageecologyr-stats

  R

  •

  Other

  •10•8•23•5•Updated Oct 16, 2025Oct 16, 2025

• everglades-website

  Public
  computer-visionbirdsremote-sensing+ 4ecologyenvironmental-monitoringevergladesenvironmental-data-science

  TeX

  •

  MIT License

  •1•0•2•0•Updated Oct 1, 2025Oct 1, 2025

• PortalSeasonality

  Public
  Project studying temporal shifts in seasonality across weather, plants, and rodents

  R

  •0•0•0•0•Updated Oct 1, 2025Oct 1, 2025

• MacaulayLibraryLookup

  Public
  A python tool to look up catalog numbers in Cornell Macaulay Library

  Python

  •

  MIT License

  •0•1•0•0•Updated Sep 28, 2025Sep 28, 2025

• website

  Public
  Lab website

  TeX

  •

  MIT License

  •24•5•1•0•Updated Aug 19, 2025Aug 19, 2025

• neonwranglerpy

  Public
  Python

  •

  MIT License

  •5•4•3•0•Updated Jul 17, 2025Jul 17, 2025

• WestFall_Allometries

  Public
  A cursor project to replicate the westfall tree allometries -> https://www.fs.usda.gov/sites/default/files/fs_media/fs_document/biomass-modeling-system.pdf

  MIT License

  •1•0•0•0•Updated Jul 14, 2025Jul 14, 2025

• allometry

  Public archive
  FIA allometry from westfall 2024

  0•0•0•0•Updated Jul 14, 2025Jul 14, 2025

• deepforest-agent

  Public
  MIT License

  •1•0•0•3•Updated Jul 2, 2025Jul 2, 2025

• portalr

  Public
  A collection of functions to summarize the Portal Data

  ecologycommunity-ecologysmall-mammal-trapping

  R

  •

  Other

  •12•12•4•0•Updated Jun 26, 2025Jun 26, 2025

• wadem-workflow

  Public
  Workflow for nightly HPC runs of WADEM

  Shell

  •

  MIT License

  •1•0•2•0•Updated Jun 23, 2025Jun 23, 2025

• EvergladesSpeciesModel

  Public
  A deepforest model for wading bird species prediction.

  Python

  •

  MIT License

  •1•1•14•0•Updated Jun 20, 2025Jun 20, 2025

• TreeSegmentation

  Public
  Reproducible analysis of tree segmentation methods in R.

  HTML

  •4•9•4•0•Updated Jun 16, 2025Jun 16, 2025